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A comparative study between fished and protected inter-reefal shoal habitats and their fish communities on the Great Barrier Reef

Report on ongoing monitoring off Townsville and initial surveys near Cardwell and Cairns, North Queensland

Research Report

Peter Speare and Marcus Stowar

Australian Institute of Marine Science

ISBN 9781921359057
Published May 2008 

MTSRF Project 4.8.2 - Effects of the Great Barrier Reef Zoning Plan on inshore habitats and biodiversity:  Shoals

Abstract

This report encompasses baseline studies of fish and habitats on shoal ground in the Cardwell and Cairns regions of the Great Barrier Reef, and seasonal monitoring of an established set of contrasting sites (closed and open to fishing) in the vicinity of Townsville.  Acoustic mapping techniques were utilised to provide topographical imagery of all study sites for the purposes of directing towed video for habitat classification, and the deployment of Baited Remote Underwater Video Stations (BRUVS) for the acquisition of fish species and their relative abundance in habitats on these shoal areas.

Townsville:  All sites in the Townsville region were from unconsolidated sandy sediments supporting marine plants with patches of structurally more complex and diverse epibenthic communities of filter feeders and some hard corals. One site, RAP 4 was centred on the wreck of a wooden trawler.

BRUVS sampled 150 species from 39 Families of fish over four discreet sampling events between July 2006 and March 2007. There was roughly twice the number of species recorded from each set on complex habitat compared to the surrounding habitat (109 versus 71 species overall). Species richness did not vary with the level of protection or throughout the sampling period.

The distribution and relative abundance of fish assemblages varied with protection and location on each of the two principal habitat types. There was an interaction between these two factors which was due to the fish assemblages in the complex habitat on Magnetic Shoal having greater similarity to those on the Mackerel Patch, and the fish assemblages over sand at RAP 4 and RAP 16 being distinct from those in the green zone and Magnetic Shoal.

The distributions and relative abundances of 22 species potentially targeted by fishers were similarly influenced by the level of protection, but possibly because of a confounded site effect. There was believable evidence of an increase in the abundance of Plectropomus maculatus and Choerodon venustus in the new green zone.

Cardwell: The shoal study sites off Cardwell are founded on rocky substrate with surrounding fine sand sediments. Their inshore and relatively shallow water attributes ensure relatively turbid conditions in response to wind driven wave and tidal movements.

BRUVS sampled 65 species from 27 families with, on average, twelve species from the rocky substrates and six species from the muddy sand bottom surrounding these outcrops. While there was site-associated differences in the fish communities (distribution and relative abundance) the greatest dissimilarity between fish assemblages could be attributed to the two principal habitat divisions (hard rock and soft sediment). Parupeneus indicus, Plectropomas maculatus, Choerodon schoenleinii and Scarus ghobban were strongly correlated with hard bottom habitat, whereas Scomberomorous queenslandicus, Carangoides coeruleopinnatus and Nemipterus furcosus were indicative of open bottom habitat. Fish communities were similar across sites on rocky substrate, but there was a site effect in relation to fish assemblages over the soft sediments that was attributed to the more mobile species inhabiting these areas.

Of fourteen targeted species, there was evidence that Lutjanus erythropterus, Epinephelus coioides, Scomberomorus queenslandicus, Choerodon schoenleinii and Lethrinus laticaudis are more abundant at Brook Shoal, which was protected from fishing in 2004.

The limited extent of rocky habitat at both Brook Shoal and Forty Foot Rock precluded extensive sampling effort, which means that more temporal effort must be employed to resolve any zoning effects.

Cairns:  Three paired sites with contrasting zoning were established in the Cairns region on deep-water shoals in the vicinity of emergent coral reefs. In general, all sites offered similar habitats except that the sites adjacent to Green Island lacked marine plants, possibly in response to lower light levels coincident with higher turbidity.

Cairns sites shared 140 fish species from diverse taxonomic and trophic functional groups. Fish assemblages had a strong association with either the sandy open bottom or the structurally and biologically diverse reef habitats, with more than twice the number of species associating with the complex habitat.

The distributions and relative abundances of 24 species of interest to fishers were not discriminated simply on the basis of protection because of interactions between location and habitat effects. Plectropomus leopardus and Lethrinus lentjan were more abundant at the protected site adjacent to Michaelmas reef and Argyrops spinifer at the protected site adjacent to Green Island, but thus far the effects of the rezoning have not had a large impact upon the fish communities of reefs near to Cairns.

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