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Arthington, A. H., Naiman, M. E., McClain, E. and Nilsson, C.
(2009) Preserving the biodiversity and ecological services
of rivers: New challenges and research
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Freshwater Biology 55: 1-16.
Bainbridge, Z., Brodie, J., Faithful, J., Sydes, D. and Lewis,
S. (2009) Identifying the land-based sources of suspended
sediments, nutrients and pesticides discharged to the Great Barrier
Reef from the Tully/Murray Basin, Queensland,
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Marine and Freshwater Research (In press).
Balcombe, S. R., Bunn, S. E., Arthington, A. H., Fawcett, J. H.,
McKenzie-Smith, F. J. and Wright, A. (2007) Fish larvae,
growth and biomass relationships in an Australian arid zone
river: Links between floodplains and waterholes.
Freshwater Biology 52(12): 2385-2398
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Balcombe, S. R. and Arthington, A. H. (2009) Temporal
changes in fish abundance in response to hydrological variability
in a dryland floodplain river.
Marine Freshwater Research 60(2): 146-159
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Barbier, E. B., Koch, E. W., Silliman, B. R., Hacker, S. D.,
Wolanski, E., Primavera, J., Granek, E. F., Polasky, S., Aswani,
S., Cramer, L. A., Stoms, D. M., Kennedy, C. J., Bael, D., Kappel,
C. V., Perillo, G. M. E. and Reed, D. J. (2008) Coastal
ecosystem-based management with non-linear ecological functions and
values.
Science 319: 321-323 [doi:10.1126/science.1150349]
Barbier, E. B., Koch, E. W., Silliman, B. R., Hacker, S. D.,
Wolanski, E., Primavera, J., Granek, E. F., Polasky, S., Aswani,
S., Cramer, L. A., Stoms, D. M., Kennedy, C. J., Bael, D., Kappel,
C. V., Perillo, G. M. E. and Reed, D. J. (2008)
Vegetation's role in coastal protection:
Response.
Science 320: 176-177
[doi:10.1126/science.320.5873.176b]
Bond, N. R., Lake, P. S. and Arthington, A. H. (2008)
The impacts of drought on freshwater ecosystems: An
Australian perspective.
Hydrobiologia 600(1): 3-16
[doi:10.1007/s10750-008-9326-z]
Bourne, D., Iida, Y., Uthicke, S. and Smith-Keune, C. (2008)
Changes in coral-associated microbial communities during a
bleaching event.
The ISME Journal 2: 350-363.
Brodie, J., Lewis, S., Bainbridge, Z., Mitchell, A., Kroon, F.
and Waterhouse, J. (2009) Target setting for pollutant
discharge management of rivers in the Great Barrier Reef catchment
area.
Marine and Freshwater Research (In press).
Cooper, T. F., Gilmour, J. P. and Fabricius, K. E. (2009)
Bioindicators of changes in water quality on coral
reefs: Review and recommendations for monitoring
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Coral Reefs 28(3): 589-606
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Cooper, T. F., Ridd, P. V., Ulstrup, K. E., Humphrey, C.,
Slivkoff, M. and Fabricius, K. E. (2008) Temporal dynamics
in coral bioindicators for water quality on coastal coral reefs of
the Great Barrier Reef.
Marine and Freshwater Research 59: 703-716 [doi:
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Cooper, T. F. and Ulstrup, K. E. (2009) Mesoscale
variation in the photophysiology of the reef building coral
Pocillopora damicornis along an environmental
gradient.
Estuarine, Coastal and Shelf Science 83(2):
186-196[doi:10.1016/j.ecss.2009.03.015]
Cooper, T. F., Uthicke, S., Humphrey, C. and Fabricius, K. E.
(2007) Gradients in water column nutrients, sediment
parameters, irradiance and coral reef development in the Whitsunday
region, central Great Barrier Reef.
Estuarine, Coastal and Shelf Science 74(3): 458-470
[doi:10.1016/j.ecss.2007.05.020]
Davis, A., Lewis, S. E., Bainbridge, Z. T., Glendenning, L.,
Turner, R. D. R. and Brodie, J. E. (2011) Dynamics of
herbicide transport and partitioning under event flow conditions in
the lower Burdekin region, Australia.
Marine Pollution Bulletin (in press)
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De'ath, G. and Fabricius, K. (2010) Water quality as a
regional driver of coral biodiversity and macroalgae on the Great
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Devlin, M. and Schaffelke, B. (2009) Spatial extent of
riverine flood plumes and exposure of marine ecosystems in the
Tully coastal region, Great Barrier Reef.
Marine and Freshwater Research (In press).
Fabricius, K., Okaji, K. and De'ath, G. (2010) Three
lines of evidence to link outbreaks of the crown-of-thorns seastar
Acanthaster planci to the release of larval food
limitation. Coral Reefs (Accepted for
publication).
Gottschalk, S., Uthicke, S. and Heimann, K. (2007)
Benthic diatom community composition in three regions of
the Great Barrier Reef, Australia. Coral
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Hauri, C., Fabricius, K., Schaffelke, B. and Humphrey, C. (In
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Hughes, A. O., Olley, J. M., Croke, J. C. and McKergow, L. A.
(2008) Sediment source changes over the last 250 years in a
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Geomorphology 104(3-4): 262-275
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Humphrey, C. A., Codi King, S. and Klumpp, D. W. (2007)
A multibiomarker approach in barramundi (Lates
calcarifer) to measure exposure to contaminants in estuaries
of tropical North Queensland.
Marine Pollution Bulletin 54(10): 1569-1581
[doi:10.1016/j.marpolbul.2007.06.004]
Humphrey, C., Weber, M., Lott, C., Cooper, T. and Fabricius, K.
(2008) Effects of suspended sediments, dissolved inorganic
nutrients and salinity on fertilisation and embryo development in
the coral Acropora millepora (Ehrenberg, 1834).
Coral
Reefs 27(4): 837-850 [doi:10.1007/s00338-008-0408-1]
Karim, F., Kinsey-Henderson, A., Wallace, J., Arthington, A. H.
and Pearson, R. G. (2010) Hydrodynamic modelling of flood
induced wetland connectivity in a tropical floodplain in North
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Processes.
Karim, F., Kinsey-Henderson, A., Wallace, J., Godfrey, P. and
Arthington, A. H. (2010) Hydrodynamic modelling of wetland
connectivity via the drainage network in a tropical floodplain in
North Queensland, Australia. Submitted to
Hydrological Processes.
Knight, J. T. and Arthington, A. H. (2008) Distribution
and habitat associations of the endangered Oxleyan pygmy perch,
Nannoperca oxleyana Whitley, in eastern
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and Freshwater Ecosystems 18(7): 1240-1254
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Lambrechts, J., Hanert, E., Deleersnijder, E., Bernard, P.-E.,
Legat, V., Remacle, J.-F. and Wolanski, E. (2008) A
multi-scale model of the hydrodynamics of the whole Great Barrier
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Estuarine, Coastal and Shelf Science 79(1): 143-151
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Le Grand, H. and Fabricius, K. (In review) Relationship
of internal macrobioeroder densities to the nutrient status of
coral reefs: Review and case study. Coral
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Lewis, S. E., Brodie, J. E., Bainbridge, Z. T., Rohde, K. W.,
Davis, A. M., Masters, B. L., Maughan, M., Devlin, M. J., Mueller,
J. F. and Schaffelke, B. (2009) Herbicides: A new
threat to the Great Barrier Reef.
Environmental Pollution
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Likens, G. E., Walker, K. F., Davies, P. E., Brookes, J., Olley,
J., Young, W. J., Thoms, M. C., Lake, S., Gawne, B., Davis, J.,
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Ecosystem science: Toward a new paradigm for managing
Australia's inland aquatic ecosystems. Marine and
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Mackay, S. J., James, C. and Arthington, A. H. (2009)
Macrophytes as indicators of stream condition in the Wet
Tropics region, Northern Queensland, Australia.
Ecological Indicators (In press)
[doi:10.1016/j.ecolind.2009.06.017]
Medeiros, S. E. F. and Arthington, A. H. (2008) Diel
variation in food intake and diet composition of three native fish
species in floodplain lagoons of the Macintyre River,
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Journal of Fish Biology 73(4): 1024-1032
[doi:10.1111/j.1095-8649.2008.01959.x]
Medeiros, E. S. F. and Arthington, A. H. (2008) The
importance of zooplankton in the diets of three native fish species
in floodplain waterholes of a dryland river, the Macintyre River,
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Hydrobiologia 614(1): 19-31
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Negri, A. P., Mortimer, M., Carter, S. and Müller, J. F.
(2009) Persistent organochlorines and metals in estuarine
mud crabs of the Great Barrier Reef.
Marine Pollution Bulletin 58(5): 769-773
[doi:10.1016/j.marpolbul.2009.03.004]
Negri, A. P., Soo, R. M., Flores, F. and Webster, N. S. (2009)
Bacillus insecticides are not acutely harmful to
corals and sponges. Marine
Ecology Progress Series 381: 157-165
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Nobes, K., Uthicke, S. and Henderson, R. (2008) Is light
the limiting factor for the distribution of benthic symbiont
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Journal of Experimental Marine Biology and Ecology
363(1-2): 48-57 [doi:10.1016/j.jembe.2008.06.015]
Poff, N. L., Richter, B. D., Arthington, A. H., Bunn, S. E.,
Naiman, R. J., Kendy, E., Acreman, M., Apse, C., Bledsoe, B. P.,
Freeman, M. C., Henriksen, J., Jacobson, R. B., Kennen, J. G.,
Merritt, D. M., O'Keeffe, J. H., Olden, J. D., Rogers, K., Tharme,
R. E. and Warne, A. (2009) The ecological limits of
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Richmond, R. H., Rongo, T., Golbuu, Y., Victor, S., Idechong,
N., Davis, G., Kostka, W., Neth, L., Hamnett, M. and Wolanski, E.
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Shaw, M., Negri, A., Fabricius, K. and Mueller, J. (2009)
Predicting water toxicity: Pairing passive sampling
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Aquatic Toxicology 95: 108-116 [doi:
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Sheaves, M. and Johnston, R. (2010) Implications of
spatial variability of fish assemblages for monitoring of
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Sheaves, M., Johnston, R. and Connolly, R. (2010)
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Uthicke, S. and Altenrath, C. (2010) Water column
nutrients control growth and C:N ratios of symbiont-bearing benthic
foraminifera on the Great Barrier Reef, Australia.
Limnology and
Oceanography 55(4):
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Uthicke, S. and McGuire, K. (2007) Bacterial communities
in Great Barrier Reef calcareous sediments: Contrasting 16S
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Estuarine and Coastal Shelf Science 72(1-2):
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Uthicke, S. and Nobes, K. (2008) Benthic Foraminifera as
ecological indicators of water quality on the Great Barrier
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Estuarine, Coastal and Shelf Science 78(4): 763-773
[doi:10.1016/j.ecss.2008.02.014]
Uthicke, S., Llewellyn, L. and Eder, F. (2009)
Fluorescent lectin assay to quantify particulate marine
polysaccharides on 96-well filtration plates.
Limnology
and Oceanography: Methods 7: 449-458.
Uthicke, S., Thompson, A. and Schaffelke, B. (2010)
Effectiveness of benthic foraminiferal and coral
assemblages as water quality indicators on inshore reefs of the
Great Barrier Reef, Australia.
Coral Reefs 29: 209-225
[doi:10.1007/s00338-009-0574-9]
van Oosterom, J., Codi King, S., Negri, A., Humphrey, C. and
Mondon, J. (2010) Investigation of the mud crab (Scylla
serrata) as a potential bio-monitoring species for tropical coastal
marine environments of Australia.
Marine Pollution Bulletin 60(2): 283-290
[doi:10.1016/j.marpolbul.2009.09.007]
Wallace, J. S., Hawdon, A., Keen, R. and Stewart, L. (2009)
The role of coastal floodplains in generating sediment and
nutrient fluxes to the Great Barrier Reef lagoon in
Australia. International Journal of Ecohydrology
and Hydrobiology 8: 183-194.
Wallace, J., Stewart, L., Hawdon, A., Keen, R., Karim, F. and
Kemei, J. (2009) Flood water quality and marine sediment
and nutrient loads from the Tully and Murray catchments in North
Queensland, Australia.
Marine and Freshwater Research (In press).
White, L. and Wolanski, E. (2008) Flow separation and
vertical motions in a tidal flow interacting with a shallow-water
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Estuarine, Coastal and Shelf Science 77(3): 457-466
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Wolanski, E., Fabricius, K. E., Cooper, T. F. and Humphrey, C.
(2008) Wet season fine sediment dynamics on the inner shelf
of the Great Barrier Reef.
Estuarine, Coastal and Shelf Science 77(4): 755-762
[doi:10.1016/j.ecss.2007.10.014]
Wooldridge, S. A. (2009) Water quality and coral
bleaching thresholds: Formalising the linkage for the inshore
reefs of the Great Barrier Reef, Australia.
Marine Pollution Bulletin 58(5): 745-751
[doi:10.1016/j.marpolbul.2008.12.013]
